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07:44:24 <toru> hi people
07:44:40 <toru> is anyone using mrbayes here?
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08:33:40 <_dan> toru: i know people who use mrbayes quite heavil
08:34:18 <toru> hi _dan
08:34:35 <toru> I'm just a newbie of mrbayes
08:34:59 <toru> I would like to know if there is a bioperl/python module to prepare nexus files
08:35:10 <_dan> interesting question
08:35:15 <_dan> let me poll my people ;)
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08:37:57 <_dan> well there is a Bio::AlignIO::nexus in bioperl
08:38:49 <_dan> my phylo people are all idle
08:40:05 <_dan> and I don't know python well enough to comment
08:41:48 <toru> I know the bioperl module
08:42:04 <toru> but it doesn't handle what I am looking for
08:53:13 <_dan> ah I just spoke to my colleague
08:53:21 <_dan> his comment was 'I just write them myself'
08:53:53 <_dan> ie the code to generate the nexus files
09:26:10 <toru> ok thanks
09:26:15 <toru> too bad
09:26:26 <toru> I would like to contribute to bioperl with some code
09:26:52 <toru> but maybe if your colleague already has some good scripts, he could do it instead
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13:35:47 <kanzure> What is dUMPNPP?
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23:06:07 <kanzure> I want to play with protein structures in an app. Any suggestions?
23:06:17 <kanzure> http://heybryan.org/mediawiki/index.php/Computational_biology